Package: NetworkToolbox 1.4.3
NetworkToolbox: Methods and Measures for Brain, Cognitive, and Psychometric Network Analysis
Implements network analysis and graph theory measures used in neuroscience, cognitive science, and psychology. Methods include various filtering methods and approaches such as threshold, dependency (Kenett, Tumminello, Madi, Gur-Gershgoren, Mantegna, & Ben-Jacob, 2010 <doi:10.1371/journal.pone.0015032>), Information Filtering Networks (Barfuss, Massara, Di Matteo, & Aste, 2016 <doi:10.1103/PhysRevE.94.062306>), and Efficiency-Cost Optimization (Fallani, Latora, & Chavez, 2017 <doi:10.1371/journal.pcbi.1005305>). Brain methods include the recently developed Connectome Predictive Modeling (see references in package). Also implements several network measures including local network characteristics (e.g., centrality), community-level network characteristics (e.g., community centrality), global network characteristics (e.g., clustering coefficient), and various other measures associated with the reliability and reproducibility of network analysis.
Authors:
NetworkToolbox_1.4.3.tar.gz
NetworkToolbox_1.4.3.zip(r-4.5)NetworkToolbox_1.4.3.zip(r-4.4)NetworkToolbox_1.4.3.zip(r-4.3)
NetworkToolbox_1.4.3.tgz(r-4.4-any)NetworkToolbox_1.4.3.tgz(r-4.3-any)
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NetworkToolbox.pdf |NetworkToolbox.html✨
NetworkToolbox/json (API)
NEWS
# Install 'NetworkToolbox' in R: |
install.packages('NetworkToolbox', repos = c('https://alexchristensen.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/alexchristensen/networktoolbox/issues
- behavOpen - NEO-PI-3 for Resting-state Data
- neoOpen - NEO-PI-3 Openness to Experience Data
- openness - Four Inventories of Openness to Experience
- openness.key - Four Inventories of Openness to Experience
Last updated 2 years agofrom:3fe11eb753. Checks:OK: 1 NOTE: 5 ERROR: 1. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Oct 27 2024 |
R-4.5-win | ERROR | Oct 27 2024 |
R-4.5-linux | NOTE | Oct 27 2024 |
R-4.4-win | NOTE | Oct 27 2024 |
R-4.4-mac | NOTE | Oct 27 2024 |
R-4.3-win | NOTE | Oct 27 2024 |
R-4.3-mac | NOTE | Oct 27 2024 |
Exports:adapt.abetweennessbinarizeclosenessclustcoeffcomcatcomm.closecomm.eigencomm.strconnconvert2igraphconvertConnBrainMatcor2covcore.itemscpmEVcpmFPcpmFPpermcpmIVcpmIVpermcpmPlotdCordCor.paralleldegreedependdepnadescdesc.alldistancediversityECOECOplusMaSTedgerepeigenvectorflow.fracgatewaygfcnv_logdethybridimpactis.graphicalkldlattnetleverageLoGolouvainMaSTMFCFnet.coveragenetwork.coveragenetwork.permutationneuralnetfilterparticipationpathlengthsrandnetregresp.reprmserspbcsim.chordalsim.swnsmallworldnessstablestrengththresholdTMFGtransitivityun.direct
Dependencies:abindbackportsbase64encbslibcachemcheckmatecliclustercodetoolscolorspacecorpcorcorrplotcpp11data.tabledigestdoParallelevaluatefansifarverfastmapfdrtoolfontawesomeforeachforeignFormulafsggplot2glassoglmnetglueGPArotationgridExtragtablegtoolshighrHmischtmlTablehtmltoolshtmlwidgetsigraphIsingFitisobanditeratorsjpegjquerylibjsonliteknitrlabelinglatticelavaanlifecyclemagrittrMASSMatrixmemoisemgcvmimemnormtmunsellnlmennetnumDerivpbapplypbivnormpillarpkgconfigplyrpngppcorpsychpwrqgraphquadprogR.matlabR.methodsS3R.ooR.utilsR6rappdirsRColorBrewerRcppRcppEigenreshape2rlangrmarkdownrpartrstudioapisassscalesshapestringistringrsurvivaltibbletinytexutf8vctrsviridisviridisLitewithrxfunyaml