Package: SemNeT 2.1.1

SemNeT: Methods and Measures for Semantic Network Analysis

Implements several functions for the analysis of semantic networks including different network estimation algorithms, partial node bootstrapping (Kenett, Anaki, & Faust, 2014 <doi:10.3389/fnhum.2014.00407>), random walk simulation, and a function to compute global network measures. Significance tests, including permutation testing, and plotting features are also implemented.

Authors:Alexander P. Christensen [aut, cre], Yoed N. Kenett [aut, ctb], Chun-Ying Tu [ctb], Martin Chodorow [ctb], Patricia J. Brooks [ctb], Emilia Ezrina [ctb], Virginia Valian [ctb]

SemNeT_2.1.1.tar.gz
SemNeT_2.1.1.zip(r-4.7-x86_64)SemNeT_2.1.1.zip(r-4.7-arm64)SemNeT_2.1.1.zip(r-4.6-x86_64)SemNeT_2.1.1.zip(r-4.6-arm64)SemNeT_2.1.1.zip(r-4.5-x86_64)
SemNeT_2.1.1.tgz(r-4.6-x86_64)SemNeT_2.1.1.tgz(r-4.6-arm64)SemNeT_2.1.1.tgz(r-4.5-x86_64)SemNeT_2.1.1.tgz(r-4.5-arm64)
SemNeT_2.1.1.tar.gz(r-4.7-arm64)SemNeT_2.1.1.tar.gz(r-4.7-x86_64)SemNeT_2.1.1.tar.gz(r-4.6-arm64)SemNeT_2.1.1.tar.gz(r-4.6-x86_64)
SemNeT_2.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
SemNeT/json (API)

# Install 'SemNeT' in R:
install.packages('SemNeT', repos = c('https://alexchristensen.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/alexchristensen/semnet/issues

Datasets:

On CRAN:

Conda:

semantic-network-analysis

5.30 score 28 stars 36 scripts 698 downloads 1 mentions 42 exports 129 dependencies

Last updated from:f0e5c4480d. Checks:13 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64NOTE138
linux-devel-x86_64NOTE179
source / vignettesOK486
linux-release-arm64NOTE141
linux-release-x86_64NOTE151
macos-release-arm64NOTE119
macos-release-x86_64NOTE277
macos-oldrel-arm64NOTE87
macos-oldrel-x86_64NOTE259
windows-devel-arm64NOTE261
windows-devel-x86_64NOTE183
windows-release-arm64NOTE255
windows-release-x86_64NOTE108
windows-oldrel-x86_64NOTE95
wasm-releaseOK134

Exports:asplASPLbinary2responsesbootSemNeTbootstrap_SemNeTbootstrap_test_SemNeTccCCcnCNcompare_netscompare_networksconvert2cytoscapeconvert2igraphequatefinalizefind_textcleaner_objectsforward_flownrwNRWpermutation_SemNeTpfPFqQrandnet.testrandom_network_testrandom_walkrandwalkread_uploaded_fileresponse_analysisresponse.analysisresponses2binarysemantic_network_measuressemnetmeasSemNeTShinysim.fluencysimilaritysimulate_fluencytest.bootSemNeTtmfgTMFG

Dependencies:abindbackportsbase64encbootbroombslibcachemcarcarDatacheckmatecliclustercodetoolscolorspacecorpcorcowplotcpp11data.tableDBIDerivdigestdoBydplyreffectsestimabilityevaluatefarverfastmapfdrtoolfontawesomeforecastforeignFormulafracdifffsfuturefuture.applygenericsggplot2glassoglobalsglueGPArotationgridExtragtablegtoolshighrHmischtmlTablehtmltoolshtmlwidgetsigraphinsightisobandjpegjquerylibjsonliteknitrlabelinglatticelavaanlifecyclelistenvlme4lmtestmagrittrMASSMatrixMatrixModelsmemoisemgcvmimeminqamitoolsmnormtmodelrnlmenloptrnnetnumDerivparallellypbapplypbivnormpbkrtestpillarpkgconfigplyrpngprogressrpsychpurrrqgraphquadprogquantregR6rappdirsrbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreformulasreshape2rlangrmarkdownrpartrstudioapiS7sassscalesSparseMstringistringrsurveysurvivaltibbletidyrtidyselecttimeDatetinytexurcautf8vctrsviridisLitewithrxfunyamlzoo

Readme and manuals

Help Manual

Help pageTopics
SemNeT-packageSemNeT-package SemNeT
Frequency of Animal Responsesanimals.freq
Average Shortest Path LengthASPL aspl
Convert a Binary Response Matrix to Raw Responsesbinary2responses
Bootstrapped Semantic Network Analysis (Legacy)bootSemNeT
Bootstrapped Semantic Network Analysisbootstrap_SemNeT
Statistical Tests for 'bootstrap_SemNeT'bootstrap_test_SemNeT
Clustering CoefficientCC cc
Community Network EstimationCN cn
Compare Graphs (Legacy)compare_nets
Plot Networks for Comparisoncompare_networks
Convert an Adjacency Matrix to Cytoscape Formatconvert2cytoscape
Convert a Network to igraph's Formatconvert2igraph
Equate Groupsequate
Finalize a Response Matrixfinalize
Find Usable 'textcleaner' Objects in the Global Environmentfind_textcleaner_objects
Forward Flowforward_flow
High Openness to Experience Networknet.high
Low Openness to Experience Networknet.low
Naive Random Walk Network EstimationNRW nrw
Simulated Result for Dataset Oneone.result
Binary response Matrices (Openness and Verbal Fluency)open.binary
Cleaned response Matrices (Openness and Verbal Fluency)open.clean
Groups for Openness and Verbal Fluencyopen.group
Permutation Test for Network Measurespermutation_SemNeT
Pathfinder NetworkPF pf
Plot for 'bootSemNeT' (Legacy)plot.bootSemNeT
Plot for 'bootstrap_SemNeT'plot.bootstrap_SemNeT
Plot for 'permutation_SemNeT'plot.permutation_SemNeT
ModularityQ q
Random Network Test (Legacy)randnet.test
Test Against Random Networksrandom_network_test
Random Walk Simulationrandom_walk
Random Walk Simulation (Legacy)randwalk
Read a Response or Group File in Any Supported Formatread_uploaded_file
Response Analysisresponse_analysis
Response Pattern Analysis (Legacy)response.analysis
Convert Raw Responses to a Binary Response Matrixresponses2binary
Semantic Network Measuressemantic_network_measures
Semantic Network Measures (Legacy)semnetmeas
Shiny App for 'SemNeT'SemNeTShiny
Simulate Verbal Fluency Data (Legacy)sim.fluency
Measures of Similaritysimilarity
Simulate a Verbal Fluency Binary Response Matrixsimulate_fluency
Statistical Tests for 'bootSemNeT' (Legacy)test.bootSemNeT
Triangulated Maximally Filtered GraphTMFG tmfg
Simulated Result for Dataset One and Twotwo.result
Plots for Vignettevignette.plots